@mschmids : I guess you're using IMAP?
I guess it works then because every change takes place on the mail server.
I didn't explain, but I use POP3, which means I'm downloading and storing my emails on my phone.
The folders are on my phone, and need to be merged there. So your solution may help others, but in my case it won't solve my issue.
Nevertheless thanks for your suggestion!
Just edited my original question to include mail protocol.
Kind regards, Alter